SRR1527010_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1527010_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	717163
Sequences flagged as poor quality	0
Sequence length	64
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTTGCCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCAT	43301	6.037818459680714	No Hit
GTTGCCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCCT	2417	0.33702240634277003	No Hit
GTTGCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCC	1896	0.26437504444596277	No Hit
GTTGCCGGGCGGGGAGGTAGTGACGAAAAATAACAATACAGGACTCTTTCGAGGCCCTGTAATT	1838	0.256287622200253	No Hit
GTTGCCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCCTGCAT	1501	0.20929691018638721	No Hit
GTTGCCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCACGCAT	1009	0.14069325941243482	No Hit
GTTGCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTC	956	0.133303028739631	No Hit
GTTGCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCC	935	0.13037482413342572	No Hit
GTTGCCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCAC	755	0.10527592750880903	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACCCT	15	0.0046825493	58.01238	43
GCATAAC	15	0.0047385427	57.83846	9
GGTCGTA	20	2.0377572E-4	57.83846	9
TCGCGTA	15	0.0047385427	57.83846	19
CATGCAT	6250	0.0	56.73002	58
CGGGTAC	10800	0.0	56.618355	6
CCATGCA	6545	0.0	56.54396	57
ATTAAGC	7770	0.0	56.31295	51
AGATTAA	7875	0.0	56.070435	49
TAGCATA	9185	0.0	56.03138	30
GGTACCT	10645	0.0	55.98423	8
GTAGCAT	9415	0.0	55.95455	29
GGGTACC	10740	0.0	55.93391	7
GTACCTG	10615	0.0	55.90415	9
GTTGATC	10370	0.0	55.892914	16
AGTAGCA	9360	0.0	55.89253	28
ACGATTA	265	0.0	55.870117	48
GCCATGC	7130	0.0	55.805725	56
CAGTAGC	9495	0.0	55.79915	27
GCCAGTA	9565	0.0	55.798965	25