SRR1526970_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526970_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	614980
Sequences flagged as poor quality	0
Sequence length	64
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGGTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCAT	33191	5.3970860841002954	No Hit
GTGGTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCCT	2193	0.3565969625028456	No Hit
GTGGTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCC	1488	0.24195908810042602	No Hit
GTGGTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCCTGCAT	1451	0.23594263228072457	No Hit
GTGGTAGGGCGGGGAGGTAGTGACGAAAAATAACAATACAGGACTCTTTCGAGGCCCTGTAATT	1206	0.19610393833945822	No Hit
GTGGTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTC	963	0.15659045822628379	No Hit
GTGGTAGGGGTACGCTTAGGTGGGCAGTCCTGTGGGGAAAACATCTTGTCTCCATCTTGCTAGG	953	0.1549643890858239	No Hit
GTGGTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCC	807	0.1312237796351101	No Hit
GTGGTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCACGCAT	799	0.1299229243227422	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACTAA	15	0.0047007096	57.954693	31
CACATAT	15	0.0047204555	57.893364	26
GCACATA	15	0.0047234986	57.88394	25
TAGGGTA	8995	0.0	57.477863	5
AGGGTAC	8730	0.0	57.460236	6
GTAGGGT	11015	0.0	57.13637	4
GGTACCT	8665	0.0	56.602028	8
GGGTACC	8730	0.0	56.529167	7
TGATCCT	8420	0.0	56.42414	18
TGGTAGG	62155	0.0	56.414764	2
GTACCTG	8690	0.0	56.36348	9
GTTGATC	8570	0.0	56.339638	16
TTGATCC	8545	0.0	56.335087	17
ACCTGGT	8690	0.0	56.32778	11
GTACGCT	190	0.0	56.30569	10
TACCTGG	8700	0.0	56.298695	10
ATGCTTG	7410	0.0	56.254528	36
TATGCTT	7360	0.0	56.24527	35
ATATGCT	7350	0.0	56.233746	34
GGTAGGG	61820	0.0	56.232113	3