SRR1526958_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526958_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	446949
Sequences flagged as poor quality	0
Sequence length	64
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGTTTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCAT	22484	5.03055158418522	No Hit
AGTTTAGGGCGGGGAGGTAGTGACGAAAAATAACAATACAGGACTCTTTCGAGGCCCTGTAATT	1510	0.3378461524692974	No Hit
AGTTTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCCT	1053	0.23559735003322527	No Hit
AGTTTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCC	738	0.16511951027969635	No Hit
AGTTTAGGGAAGCAGTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	677	0.15147142067663202	No Hit
AGTTTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCCTGCAT	676	0.15124768150281126	No Hit
AGTTTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTC	663	0.14833907224314183	No Hit
AGTTTAGGGGGGGAGGTAGTGACGAAAAATAACAATACAGGACTCTTTCGAGGCCCTGTAATTG	528	0.11813428377734371	No Hit
AGTTTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCACGCAT	501	0.1120933260841841	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGATCG	15	0.004674414	58.034245	50
CGTAGAA	20	2.0031753E-4	58.034245	51
CGATTAA	125	0.0	58.021214	49
AACGATT	130	0.0	58.021214	47
ATTATCC	15	0.0046806512	58.0147	45
GTCTAAA	15	0.0046827313	58.00819	42
ATTATAC	15	0.0046827313	58.00819	42
TAGTAAC	15	0.0046827313	58.00819	43
GTACGTA	30	3.7615246E-7	57.988667	39
CGACACT	15	0.004701485	57.949665	32
AGGGTAC	4980	0.0	57.418842	6
TAGGGTA	5195	0.0	57.335945	5
TTAGGGT	6685	0.0	57.032326	4
TAGGGAT	2750	0.0	56.956688	5
TTTAGGG	44835	0.0	56.855186	3
GTTTAGG	45165	0.0	56.85155	2
TTAGGGG	23015	0.0	56.843807	4
AGTTTAG	45485	0.0	56.68207	1
TAGGGGG	11585	0.0	56.563877	5
ATATGCT	4300	0.0	56.547295	34