SRR1526786_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526786_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	447706
Sequences flagged as poor quality	0
Sequence length	64
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCC	1929	0.4308631110594899	No Hit
GCCTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCC	967	0.21598995769545193	No Hit
GCCTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTC	868	0.19387723193345635	No Hit
GCCTAGGGGAAGCAGTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	802	0.1791354147587926	No Hit
GCCTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTCTTCCGAAGGTCC	701	0.15657596726423142	No Hit
GCCTAGGGGGGGGCTGGAGAGATGGCTCAGAGGTTAAAAGCACTGACTGCTCTTTCAGAGGTCC	671	0.14987514127574791	No Hit
GCCTAGGGAGCCCTCCCTACTCTCTTGAATACCATCAATAAAGTTCGCTGCACCCAAAAAAAAA	572	0.12776241551375234	No Hit
GCCTAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	469	0.10475624628662558	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGATG	15	0.0047059557	57.93577	33
TAGGGGG	27675	0.0	55.37887	4
CCTAGGG	46020	0.0	55.199787	2
CTAGGGG	44405	0.0	55.157486	3
GCCTAGG	46700	0.0	54.90245	1
TAGGGGT	2610	0.0	54.70942	4
TAGGGGA	10925	0.0	54.277134	4
AGGGGAT	2440	0.0	53.872826	5
AGGGGGG	15290	0.0	53.04716	5
TAGGGGC	3430	0.0	52.737236	4
AGGGGGA	5410	0.0	52.680504	5
GCCTAGA	415	0.0	52.357452	1
AGGGGAG	3955	0.0	52.281036	5
AGGGGAC	1915	0.0	51.937187	5
CTAGGGT	415	0.0	51.85668	3
AGGGGGC	5420	0.0	51.724808	5
AGGGGTG	1370	0.0	50.733925	5
TACGCTT	40	4.8123184E-8	50.591885	10
GTACGCT	40	4.8123184E-8	50.591885	9
AGGGGGT	3105	0.0	50.296036	5