SRR1526782_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526782_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	248454
Sequences flagged as poor quality	0
Sequence length	64
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTCATAGGGAAGCAGTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	624	0.2511531309618682	No Hit
TTCATAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCC	607	0.244310818099125	No Hit
TTCATAGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	330	0.13282136733560337	No Hit
TTCATAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTC	330	0.13282136733560337	No Hit
TTCATAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTCTTCCGAAGGTCC	312	0.1255765654809341	No Hit
TTCATAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCC	287	0.11551434068278234	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGGTTA	35	1.607259E-8	58.12265	6
TAGCGGA	15	0.004643887	58.122646	5
GTGCGAC	15	0.004658792	58.075634	49
ATATAGC	15	0.0046887095	57.981827	39
GCGGTAA	25	8.676063E-6	57.970123	38
TAGATCC	15	0.0046999655	57.94673	35
CGTTGAC	15	0.004703722	57.935043	34
GTTATTC	15	0.004703722	57.935043	34
TCGTCAA	20	2.0264972E-4	57.888325	17
CACGGTA	20	2.0366162E-4	57.83004	19
GATTAAC	20	2.0427068E-4	57.795128	9
ATAGGGT	1185	0.0	56.405945	4
TAGGGTG	620	0.0	56.247723	5
TAGGGAT	2325	0.0	56.122726	5
TAGGGGA	3240	0.0	55.61117	5
TAGGGTC	230	0.0	55.595573	5
ATAGGGG	12745	0.0	55.13557	4
AGGGATT	830	0.0	54.97142	6
CATAGGG	25540	0.0	54.83419	3
TCATAGG	25945	0.0	54.77351	2