SRR1526746_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526746_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	121924
Sequences flagged as poor quality	0
Sequence length	64
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCATCTGGGAAGCAGTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	396	0.3247924936845904	No Hit
CCATCTGGGATAGCCTCGTTGTGTGGCTTTGGCCCTAAGCCATTGTCTCTCTGGAGTGAGTTTT	277	0.22719070896624124	No Hit
CCATCTGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	233	0.19110265411239788	No Hit
CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCC	186	0.15255405006397427	No Hit
CCATCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTC	156	0.127948558118172	No Hit
CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTCTTCCGAAGGTCC	147	0.12056691053443129	No Hit
CCATCTGGGGTGTGGCCATCAAGATCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	136	0.11154489682097045	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGGTAT	70	0.0	58.06793	6
CAAATGA	15	0.0046555414	58.067924	53
TCGTGTT	15	0.0046631387	58.04403	47
GTAGGTT	20	1.9997575E-4	58.020153	42
ACAATTA	20	1.9997575E-4	58.020153	43
TATTATA	15	0.0046707448	58.020153	44
ATATTAT	15	0.0046707448	58.020153	43
TACGTAG	20	1.9997575E-4	58.020153	40
CAGTACG	20	2.0079092E-4	57.97246	37
AGTACGT	20	2.0079092E-4	57.97246	38
GTACGTA	20	2.0079092E-4	57.97246	39
GCCCTAT	15	0.0046859845	57.972458	36
GGTCCGA	15	0.0046936185	57.948643	8
GGAAGTA	15	0.0046936185	57.948643	8
TCCAAAC	15	0.0046936185	57.948643	33
CAAGTAT	15	0.0047012614	57.924843	28
TAAACAC	15	0.0047012614	57.924843	29
GCCCTAA	30	3.7672362E-7	57.924843	32
TATAAAG	15	0.0047012614	57.924843	30
CAAGTGA	15	0.0047089136	57.901066	20