SRR1526645_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526645_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1151625
Sequences flagged as poor quality	0
Sequence length	64
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTACCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCC	3501	0.3040052100293064	No Hit
TCTACCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCC	3077	0.2671876695973081	No Hit
TCTACCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCT	2772	0.240703353956366	No Hit
TCTACCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTC	2358	0.20475415174210357	No Hit
TCTACCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGT	1432	0.12434603277976773	No Hit
TCTACCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCC	1338	0.11618365353305113	No Hit
TCTACCGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCTTCCAAAGGCCCT	1186	0.10298491262346683	No Hit
TCTACCGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCCG	1161	0.10081406707912732	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACCGGG	108285	56.968983	3
CTACCGG	114235	56.967125	2
TCTACCG	115840	56.938396	1
ACCGGGA	60005	56.843975	4
CCGGGAT	19425	56.82178	5
CGGGATT	6750	56.774372	6
ACCGGGG	33400	56.720825	4
CGGGATA	2160	56.421402	6
CGGGATC	5190	56.256016	6
ACCGGGT	6320	56.20478	4
CCGGGAG	18810	56.146328	5
CCGGGAC	10145	55.936554	5
TACCGGA	4115	55.863537	3
CGGGAGT	4540	55.786476	6
CGGGAGC	5550	55.62499	6
CGGGATG	5515	55.61145	6
CGGGAAC	3645	55.38152	6
TACCGGT	965	55.364277	3
CCGGGGT	6240	55.305527	5
ACCGGGC	9195	55.277214	4