SRR1526605_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526605_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	130646
Sequences flagged as poor quality	0
Sequence length	56
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	664	0.5082436507815011	No Hit
AGATGGGGGAAGCAGTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTT	473	0.3620470584633284	No Hit
AGATGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	318	0.243405844801984	No Hit
AGATGGGGGGTGTGGCCATCAAGATCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAA	291	0.2227393108093627	No Hit
AGATGGGGGACCAAGGGATCTACAGAGTGAGCGAGTTTCCTGGAGAGGCCAGCGAG	261	0.19977649526200575	No Hit
AGATGGGGGGGGCTGGAGAGATGGCTTAGCAGTTAAGAGCACTGACTGCTCTTCCA	202	0.15461629135220367	No Hit
AGATGGGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	201	0.15385086416729177	No Hit
AGATGGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	189	0.14466573794834897	No Hit
AGATGGGGGCTCTTCCTGTCTGTATCAGGGCGGCGCGTGGTCCACGCCGAGCGACT	189	0.14466573794834897	No Hit
AGATGGGGGAGGCCTTTAGAGCGATGGAATGGCCATTGTCATAGCACAGAGATTTC	186	0.14236945639361326	No Hit
AGATGGGGGGGGAATTCCTTCGGCAACATTAACTGGTTGATGCTGAAAAACATCGA	171	0.13088804861993478	No Hit
AGATGGGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAACCAAA	171	0.13088804861993478	No Hit
AGATGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	155	0.1186412136613444	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAGTAT	20	3.8895285E-4	50.71027	37
ACGTGTA	15	0.007957747	50.71027	37
CATAGAA	15	0.007982355	50.6707	36
AAGCGGT	15	0.00799468	50.650936	35
TGATAAC	15	0.008019373	50.611458	34
ATTACGT	15	0.008019373	50.611458	34
TATCGAG	20	3.9271728E-4	50.611458	34
TATTACG	15	0.00809379	50.49339	33
ACTATAA	20	3.9956617E-4	50.434566	31
CGGTAGG	25	1.9734207E-5	50.434566	31
GCGAGTT	35	4.8950824E-8	50.434563	31
GGTTCTA	15	0.008244165	50.2589	40
TCGGCTG	20	4.0806556E-4	50.22003	38
AAATCTG	15	0.00829475	50.18122	50
CTACGTG	15	0.00829475	50.18122	50
GCTACGT	15	0.00829475	50.18122	49
GTATTCA	15	0.008307432	50.16184	43
AAGGTAT	15	0.008307432	50.16184	46
CGCTGTT	15	0.008307432	50.16184	43
TCGTGTA	15	0.008307432	50.16184	43