SRR1526551_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526551_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	146468
Sequences flagged as poor quality	0
Sequence length	56
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	355	0.24237376082147638	No Hit
CTGTGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	355	0.24237376082147638	No Hit
CTGTGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	311	0.21233306933937787	No Hit
CTGTGTGGGATTGCTTCTGTGTAAATTATGTACTGCAAAAATTTTTTTAAATCTTC	262	0.17887866291613183	No Hit
CTGTGTGGGAAGCAGTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTT	260	0.17751317693967283	No Hit
CTGTGTGGGAGTTCCGACACTTGTGAAACTCCGAGACGTGCCGTGGTCTCAGCAAT	177	0.12084550891662343	No Hit
CTGTGTGGGGTGTGGCCATCAAGATCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAA	175	0.11948002294016441	No Hit
CTGTGTGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	165	0.1126525930578693	No Hit
CTGTGTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	162	0.11060436409318075	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATACGT	15	0.007971418	50.6914	37
GCGACAT	15	0.007971418	50.6914	35
CAGTTGC	15	0.007971418	50.6914	35
AGTTGCT	15	0.007971418	50.6914	36
CGACGCA	15	0.007982405	50.673748	34
ATCGACG	15	0.008081789	50.51545	32
TAAGCAA	15	0.008204507	50.323307	44
CGGGTCA	15	0.008215731	50.305912	43
CGTACTG	35	5.0551535E-8	50.236454	42
GCCGGAT	15	0.008272025	50.21912	50
GCTAGGA	15	0.008272025	50.21912	49
CTACGTA	35	5.0826202E-8	50.201797	39
TACGTAC	35	5.0826202E-8	50.201797	40
ATCGCGT	15	0.008283318	50.201794	40
ACGTACT	35	5.1803E-8	50.080868	41
CTATCGA	15	0.008442628	49.96052	30
GAATACG	15	0.008442628	49.96052	30
CCTATCG	15	0.008454094	49.94338	29
ATAGCTC	20	4.2667202E-4	49.77257	22
TGACGAT	15	0.00859259	49.738552	20