SRR1526425_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526425_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	194878
Sequences flagged as poor quality	0
Sequence length	56
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATGGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	1510	0.7748437483964327	No Hit
ATGGCGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	969	0.4972341670173134	No Hit
ATGGCGGGGGGGCTGGTGAGATGGCTCAGTGGGGAAGAGCACCCGACTGCTCTTCC	699	0.3586859471053685	No Hit
ATGGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTCTTCC	362	0.18575724299305207	No Hit
ATGGCGGGGGGGGCTGGTGAGATGGCTCAGTGGGGAAGAGCACCCGACTGCTCTTC	359	0.18421781832736378	No Hit
ATGGCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	358	0.18370467677213437	No Hit
ATGGCGGGGGGGCTGGTGAGATGGCTCAGTGGGGAAGAGCACCCGACTGTTCTTCC	297	0.1524030419031394	No Hit
ATGGCGGGGGAGAGCAGCGCCTTGGAGGTCCCGTGGATCTGTGTCTTGCTTCAACA	291	0.14932419257176283	No Hit
ATGGCGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAAGCA	284	0.14573220168515685	No Hit
ATGGCGGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	262	0.1344430874701095	No Hit
ATGGCGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT	216	0.11083857592955593	No Hit
ATGGCGGGGGTGTGGCCATCAAGATCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAA	210	0.10775972659817937	No Hit
ATGGCGGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAAGC	206	0.10570716037726166	No Hit
ATGGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTCTTCC	205	0.10519401882203225	No Hit
ATGGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCT	203	0.10416773571157338	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCTACG	15	0.00807434	50.533695	37
ACGGTGA	15	0.00807434	50.533695	37
CGGACTA	15	0.00807434	50.533695	37
CGGAATA	15	0.0080826515	50.520546	36
ACGGAAT	15	0.008090968	50.507412	35
ATAGGCT	20	4.0029304E-4	50.42872	33
TATGCGT	15	0.008141007	50.42872	32
GCCTACG	15	0.008141007	50.42872	32
ATGCGTT	15	0.008141007	50.42872	33
AATAGGC	20	4.0029304E-4	50.42872	32
CTATTCG	25	2.04631E-5	50.14227	48
ACCATCG	15	0.008326453	50.142265	48
AAGGCGC	15	0.008326453	50.142265	48
TTCGAAC	20	4.1223428E-4	50.129326	47
TCGCGCA	15	0.008343467	50.116386	50
TAAGCTG	20	4.1328586E-4	50.103462	49
ACGAGTA	20	4.1328586E-4	50.103462	43
CTTTAGA	15	0.008351983	50.103455	44
TGATTGG	15	0.008360505	50.09053	40
TACGTAC	15	0.008360505	50.09053	40