SRR1526369_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526369_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	35931
Sequences flagged as poor quality	0
Sequence length	56
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	301	0.8377167348529125	No Hit
CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	214	0.5955859842475857	No Hit
CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	204	0.5677548634883527	No Hit
CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	165	0.45921349252734406	No Hit
CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	154	0.4285992596921878	No Hit
CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGCCTCAACGATTAAG	124	0.3451058974144889	No Hit
CAACAAGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	75	0.2087334056942473	No Hit
CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGCCTCAAAGATTAAG	64	0.17811917285909104	No Hit
CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTCAG	53	0.14750494002393477	No Hit
CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCGTCTTCTGCTTGGATC	49	0.13637249172024157	No Hit
CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTCAG	44	0.12245693134062509	No Hit
CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCCACGATTAAG	44	0.12245693134062509	No Hit
CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCAGTCTCAAAGATTAAG	43	0.11967381926470179	No Hit
CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCCACGATTCAG	40	0.11132448303693189	No Hit
CAACAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGCCTCAAAGATTAAG	39	0.1085413709610086	No Hit
CAACAAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAA	36	0.10019203473323872	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACAACC	20	3.9467087E-4	50.45904	38
GCCCGTC	40	2.3592293E-9	50.45904	38
GCCTGTC	45	1.1823431E-10	50.45904	38
TTCATTT	15	0.008067354	50.459038	38
TCATTTT	15	0.008067354	50.459038	39
TTAATTT	15	0.008067354	50.459038	38
AAACCAC	20	3.974369E-4	50.38787	37
TTTAATT	15	0.008112582	50.387867	37
CAACACA	50	5.456968E-12	50.246136	44
CCTCAAA	25	1.9879502E-5	50.246136	43
CCAACAC	30	9.852956E-7	50.24613	43
GCCTCAA	55	0.0	50.24613	42
CCTTGTC	15	0.008203604	50.24613	43
TATTGTC	15	0.008203604	50.24613	42
ACAACAC	15	0.008203604	50.24613	43
TATGCCC	40	2.4811015E-9	50.175564	35
CACGATT	45	1.2369128E-10	50.175564	47
ACGATTA	85	0.0	50.175564	48
CGATCCT	25	2.0046049E-5	50.175564	36
CGATTAA	85	0.0	50.175564	49