SRR1526366_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526366_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	34618
Sequences flagged as poor quality	0
Sequence length	56
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTACCGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	108	0.3119764284476284	No Hit
TCTACCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	69	0.19931827373042926	No Hit
TCTACCGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCGAACCTGCGTGCAATC	61	0.17620890866023456	No Hit
TCTACCGGGCTCGTCTTAATCAGCAACATCTTTTGATACCCAAAAAAAAAAAAAAA	52	0.15021087295626553	No Hit
TCTACCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	43	0.12421283725229648	No Hit
TCTACCGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGACAACCTGCGTGCAATC	41	0.11843549598474783	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGCAC	20	3.8217002E-4	50.782547	39
ACAAACC	15	0.007863038	50.782543	38
GCGAACC	15	0.007863038	50.782543	39
ACCAACC	15	0.007863038	50.782543	38
GGCGAAC	15	0.007863038	50.782543	38
CCACCAG	15	0.007863038	50.782543	40
CGAACCT	15	0.007863038	50.782543	40
TCCGACC	15	0.007863038	50.782543	38
GCCCTTG	15	0.007863038	50.782543	38
AGAGCCC	20	3.877988E-4	50.632748	35
TACCCAA	20	3.877988E-4	50.632748	37
CGGCGAA	15	0.007955604	50.632744	37
CCGGCGA	15	0.007955604	50.632744	36
TAGAGCC	30	9.524938E-7	50.48382	34
TGTGAAA	15	0.0082859825	50.11533	49
ACAAAAT	15	0.0082859825	50.11533	48
CTGCAAT	15	0.0082859825	50.11533	49
GCCTGCA	15	0.0082859825	50.11533	47
ATTCAAG	15	0.0082859825	50.11533	33
CGCGCAA	15	0.0082859825	50.11533	47