SRR1526363_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526363_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	42453
Sequences flagged as poor quality	0
Sequence length	56
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTCTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAA	200	0.4711092266742044	No Hit
CTTCTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAA	74	0.17431041386945564	No Hit
CTTCTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAA	74	0.17431041386945564	No Hit
CTTCTGGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	65	0.1531104986691164	No Hit
CTTCTGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAA	64	0.15075495253574542	No Hit
CTTCTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAACAAAAAAA	63	0.1483994064023744	No Hit
CTTCTGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAA	51	0.12013285280192212	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGTCTC	15	0.007945855	50.669067	40
AACAACC	30	9.33891E-7	50.669067	38
CTCCCGG	15	0.007945855	50.669067	40
CGACCCT	15	0.007945855	50.669067	40
CCCGCCG	20	3.8746605E-4	50.669064	39
TGCTTGT	15	0.008097837	50.42721	37
TACAAAC	20	3.967452E-4	50.427204	37
TCAAAGG	15	0.008174633	50.307144	36
TTGCCTG	15	0.008174633	50.307144	36
AAAAACT	15	0.008213234	50.247326	35
ACAACAC	20	4.0381972E-4	50.247326	43
AAACAAG	15	0.00825197	50.18765	46
TCTCGTT	15	0.00825197	50.18765	46
GCCTGCA	20	4.0620004E-4	50.18765	47
CAGCCGG	15	0.00832985	50.06872	50
ACTCAAA	15	0.008368994	50.009468	34
TGATACC	20	4.1340798E-4	50.009464	34
CCGCATA	15	0.008408275	49.95036	11
AACCCCC	15	0.008408275	49.95036	10
TACCTGG	20	4.1583306E-4	49.950356	10