SRR1526361_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526361_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	27013
Sequences flagged as poor quality	0
Sequence length	56
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	51	0.18879798615481436	No Hit
CACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	43	0.15918261577758858	No Hit
CACAAGGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	38	0.14067300929182244	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATGAGC	15	0.008032168	50.4803	41
GCCCAGT	20	3.9207964E-4	50.4803	41
GAGCACT	20	3.9207964E-4	50.4803	38
TACGCCC	15	0.008032168	50.4803	38
GCCATGA	15	0.008032168	50.4803	39
CTGTCGA	20	3.9207964E-4	50.4803	40
GTACGCC	15	0.008092068	50.38577	37
GCAAAGT	15	0.0082128635	50.19776	49
TGCTTTT	15	0.0082128635	50.19776	47
CGAAAGC	15	0.0082128635	50.19776	46
AAAGCCA	15	0.0082128635	50.19776	48
AAGCCAT	15	0.0082128635	50.19776	49
GAAAGCC	15	0.0082128635	50.19776	47
TTGCTTT	15	0.0082128635	50.19776	46
ATGAGCA	15	0.0082128635	50.19776	42
CCCAGTT	20	4.0313168E-4	50.197758	42
CCAACAC	15	0.008273762	50.104282	43
CCAGTTC	20	4.068702E-4	50.104282	43
AGACGAA	15	0.008273762	50.104282	43
ACGAAAG	15	0.008273762	50.104282	45