SRR1526360_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526360_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	64424
Sequences flagged as poor quality	0
Sequence length	56
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGGACTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	240	0.3725319756612443	No Hit
AGGACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	214	0.33217434496460946	No Hit
AGGACTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	202	0.31354774618154724	No Hit
AGGACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	175	0.27163789891965723	No Hit
AGGACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	131	0.20334037004842917	No Hit
AGGACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	123	0.1909226375263877	No Hit
AGGACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	89	0.1381472743077114	No Hit
AGGACTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTCCCTACCAAGCGC	87	0.13504284117720106	No Hit
AGGACTGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCA	83	0.1288339749161803	No Hit
AGGACTGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCCTGCCTAGCAAGCGCA	80	0.12417732522041476	No Hit
AGGACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGCCTCAACGATTAAG	67	0.10399850987209734	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTCTCA	25	1.9367666E-5	50.54495	41
ATACAAA	20	3.9682724E-4	50.46535	36
TATGCCT	40	2.4429028E-9	50.386005	35
TCGCCTA	20	4.077541E-4	50.188725	42
CTCAGGT	15	0.008270737	50.188725	42
CCATCTA	15	0.008296395	50.149452	33
CCCTCAC	15	0.008322111	50.11024	43
ATTTTAT	15	0.008322111	50.11024	44
CCTCAAC	20	4.1091954E-4	50.11024	43
CCGACGC	15	0.008322111	50.11024	43
CGACTCC	35	5.095535E-8	50.11024	44
CGTCACA	15	0.008322111	50.11024	44
CGATTCA	20	4.1250957E-4	50.0711	49
CGATTAA	40	2.582965E-9	50.0711	49
CAGAATG	15	0.008347888	50.071095	49
ACGATTA	40	2.5993359E-9	50.03201	48
AACGATT	55	0.0	50.03201	47
AGGGTGT	15	0.008373723	50.032005	50
ACCAAGC	60	0.0	50.032005	48
CGGTTGA	20	4.1730903E-4	49.954014	14