SRR1526354_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526354_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	46767
Sequences flagged as poor quality	0
Sequence length	56
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCAGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	124	0.265144225629183	No Hit
GCAGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	112	0.23948510701990722	No Hit
GCAGGAGGGATGAGATGGACTTAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	97	0.20741120875831248	No Hit
GCAGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGACCACCCGACTGCTCTTC	96	0.20527294887420616	No Hit
GCAGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	95	0.20313468899009987	No Hit
GCAGGAGGGATGAGATGGACTTAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	87	0.18602860991724934	No Hit
GCAGGAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	81	0.17319905061261145	No Hit
GCAGGAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	81	0.17319905061261145	No Hit
GCAGGAGGGATGAGATGGACTCAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	81	0.17319905061261145	No Hit
GCAGGAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	76	0.16250775119207989	No Hit
GCAGGAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCCCAGTTCTGAGTCG	72	0.15395471165565464	No Hit
GCAGGAGGGATGAGATGGACTCAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	70	0.149678191887442	No Hit
GCAGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACCGCTCTTC	58	0.12401907327816623	No Hit
GCAGGAGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	53	0.11332777385763466	No Hit
GCAGGAGGGATGAGATGGACTCAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	52	0.11118951397352833	No Hit
GCAGGAGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	50	0.1069129942053157	No Hit
GCAGGAGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCATGGG	47	0.10049821455299678	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAACTTC	15	0.007968481	50.64091	38
ACTTCAG	15	0.007968481	50.64091	40
CTGTCGA	15	0.007968481	50.64091	40
CAAACCA	30	9.396008E-7	50.64091	39
CCGGTCA	15	0.007968481	50.64091	40
TGTCGAC	15	0.008002866	50.58587	41
AGCCCCT	15	0.008106683	50.421448	36
TACAAAC	15	0.008106683	50.421448	37
AGAAACT	15	0.008106683	50.421448	36
CTTATCT	15	0.008211499	50.2581	44
CGACTCC	15	0.008211499	50.2581	44
CCTGGCG	15	0.008211499	50.2581	44
TTCACCC	20	4.0815113E-4	50.149788	47
GTTCACC	20	4.0815113E-4	50.149788	46
TCAGTTC	20	4.0815113E-4	50.149788	43
CCCGCTC	20	4.0815113E-4	50.149788	47
GCTCTGA	20	4.0815113E-4	50.149788	46
TCTCACG	35	5.023503E-8	50.149788	48
CCAAAAC	25	2.020302E-5	50.149784	43
CCGCTCT	45	1.2732926E-10	50.149784	48