SRR1526351_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526351_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	34813
Sequences flagged as poor quality	0
Sequence length	56
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATACAGGGGTGAGATGGACTTAAAGGAATTGACGGGTACCCACAGTTCTGAGTCGG	65	0.18671186051187774	No Hit
ATACAGGGGTGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCGG	64	0.18383937035015657	No Hit
ATACAGGGGTGAGATGGACTCAAAGGAATTGACGGGTACCCACAGTTCTGAGTCGG	55	0.1579869588946658	No Hit
ATACAGGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	53	0.1522419785712234	No Hit
ATACAGGGGTGAGATGGACTTAAATGAATTGACGGGTACCCACAGTTCTGAGTCGG	53	0.1522419785712234	No Hit
ATACAGGGGTGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCGG	49	0.1407520179243386	No Hit
ATACAGGGGTGAGATGGACTCAAAGGAATTGACGGGTACGCACAGTTCTGAGTCGG	47	0.13500703760089622	No Hit
ATACAGGGGTGAGATGGACTCAAATGAATTGACGGGTACCCACAGTTCTGAGTCGG	44	0.12638956711573263	No Hit
ATACAGGGGTGAGATGGACTCAAATGAATTGACGGGTACGCACAGTTCTGAGTCGG	40	0.11489960646884785	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTATTTA	20	3.9409826E-4	50.46939	37
TATTTAT	20	3.9409826E-4	50.46939	38
ATTTATT	20	3.9409826E-4	50.46939	39
TTCATTT	15	0.008058688	50.469387	38
CAACCTG	15	0.008058688	50.469387	41
TCATTTT	15	0.008058688	50.469387	39
CAAACCA	15	0.008058688	50.469387	39
TTTTCGT	15	0.008105323	50.395924	36
TAGCAGC	15	0.008105323	50.395924	35
TTGATAT	15	0.008246433	50.17681	49
CATTTGA	15	0.008293873	50.1042	46
TGATATG	15	0.008293873	50.1042	50
ATTTGAT	15	0.008293873	50.1042	47
CGTTCCG	40	2.5083864E-9	50.104195	44
GTAGAGC	15	0.008341516	50.03179	33
TGGTAGA	15	0.008341516	50.03179	31
TGCGCAC	15	0.008341516	50.03179	45
GTTTTGC	15	0.008341516	50.03179	28
TGGCTCG	25	2.0377158E-5	50.03179	31
GGAGAAA	25	2.0552585E-5	49.9596	20