SRR1526350_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526350_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	35704
Sequences flagged as poor quality	0
Sequence length	56
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TAAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	106	0.29688550302487116	No Hit
TAAGGGGGGATGAGATGGACTTAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	73	0.2044588841586377	No Hit
TAAGGGGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	63	0.17645081783553665	No Hit
TAAGGGGGGATGAGATGGACTCAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	61	0.1708492045709164	No Hit
TAAGGGGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	58	0.1624467846739861	No Hit
TAAGGGGGGATGAGATGGACTTAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	56	0.1568451714093659	No Hit
TAAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	55	0.1540443647770558	No Hit
TAAGGGGGGATGAGATGGACTCAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	54	0.1512435581447457	No Hit
TAAGGGGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	53	0.14844275151243558	No Hit
TAAGGGGGGATGAGATGGACTTAAATGAATTGACGGGTACGCCCAGTTCTGAGTCG	52	0.14564194488012547	No Hit
TAAGGGGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	50	0.14004033161550525	No Hit
TAAGGGGGGATGAGATGGACTCAAATGAATTGACGGGTACGCCCAGTTCTGAGTCG	45	0.12603629845395475	No Hit
TAAGGGGGGATGAGATGGACTCAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	44	0.12323549182164464	No Hit
TAAGGGGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCCAGGCTCACAACCAAA	43	0.12043468518933453	No Hit
TAAGGGGGGATGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	40	0.1120322652924042	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGACCCG	15	0.008178086	50.28531	40
CACCACT	15	0.008178086	50.28531	41
GTACCCA	20	4.0425846E-4	50.214386	37
GGTACCC	20	4.070875E-4	50.143658	36
CACACAA	15	0.0083162	50.073135	45
ACCGTTC	15	0.0083162	50.073135	45
ACTTCGG	15	0.0083162	50.073135	45
CCTTTTC	15	0.0083162	50.073135	43
CACTTCG	15	0.0083162	50.073135	44
CGACTCC	30	1.0090116E-6	50.073135	44
ACTCCTC	35	5.0391463E-8	50.07313	46
CTACACC	15	0.008362622	50.002808	21
CCAATAG	15	0.008362622	50.002808	27
CTTTAAT	15	0.008362622	50.002808	32
AACGAGT	15	0.008362622	50.002808	29
GTCGTGC	15	0.008362622	50.002808	30
GCGGTGA	15	0.008362622	50.002808	23
GCGGTCG	15	0.008362622	50.002808	27
TCGCGCA	15	0.008362622	50.002808	50
TCGTGCT	15	0.008362622	50.002808	31