SRR1526349_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526349_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	67094
Sequences flagged as poor quality	0
Sequence length	56
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGTTTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	368	0.5484842161743225	No Hit
AGTTTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	305	0.45458610307926195	No Hit
AGTTTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	296	0.44117208692282467	No Hit
AGTTTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	196	0.29212746296241093	No Hit
AGTTTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	132	0.19673890362774615	No Hit
AGTTTAGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	98	0.14606373148120547	No Hit
AGTTTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGCCTCAACGATTAAG	95	0.14159239276239305	No Hit
AGTTTAGGGCTCGTCTTAATCAGCAACATCTTTTGATACCCAAAAAAAAAAAAAAA	78	0.11625480668912272	No Hit
AGTTTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTCAG	69	0.10284079053268548	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACACCAC	25	1.9972978E-5	50.28722	37
GATCCTC	15	0.008208386	50.28722	37
AAGCGAT	25	1.9972978E-5	50.28722	37
TGCCTGT	35	4.9600203E-8	50.287216	37
CCCAGTT	15	0.008257336	50.21171	42
CCCGTGC	15	0.008257336	50.21171	43
CCCGCAC	15	0.008257336	50.21171	43
ACCAGCA	25	2.0151629E-5	50.21171	42
CGAATCT	15	0.008281892	50.17404	44
CACCATA	15	0.008281892	50.17404	44
CCAATGA	15	0.008306502	50.136433	34
TCAAGCG	25	2.0331601E-5	50.136433	35
TTCAAGC	30	1.0137337E-6	50.136433	34
GTGGGCT	15	0.008306502	50.136433	35
GTAAGAC	15	0.008306502	50.136433	34
TGAAAAC	15	0.008306502	50.136433	34
AAGTCAC	20	4.0998973E-4	50.13643	35
CTGCAAT	15	0.0083311675	50.098877	49
CGATTAA	120	0.0	50.098877	49
AACGATT	130	0.0	50.06138	47