SRR1526348_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526348_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8549
Sequences flagged as poor quality	0
Sequence length	56
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTTGCGGGGAGACCGCACTCGGACCTGCTCCGCTCCTGCCCCGCGGCCAAGGAGA	22	0.2573400397707334	No Hit
ATTTGCGGGGATCCAGTGACAGATACCATTAGATTCAAGCCATAGAATATGAAGGA	14	0.1637618434904667	No Hit
ATTTGCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	12	0.14036729442040005	No Hit
ATTTGCGGGATGCTTCCCAGAGTAAACTGTCATGACTTTGCTTTTGGGGTCCATGC	11	0.1286700198853667	No Hit
ATTTGCGGGCTCGTCTTAATCAGCAACATCTTTTGATACCCAAAAAAAAAAAAAAA	10	0.11697274535033338	No Hit
ATTTGCGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCA	9	0.10527547081530003	No Hit
ATTTGCGGGGATCCAGTGACAGATACCATTAGATTCAAGCGATAGAATATGAAGGA	9	0.10527547081530003	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTCATTT	15	0.007984301	50.254436	41
ACCGTAA	15	0.007984301	50.254436	39
GCTACCG	15	0.007984301	50.254436	36
CCGTAAA	15	0.007984301	50.254436	40
TACCGTA	15	0.007984301	50.254436	38
CGTAAAC	20	3.8530413E-4	50.254436	41
CTACCGT	15	0.007984301	50.254436	37
GCGGGAA	105	0.0	49.958828	5
GCGGGGT	75	0.0	49.958824	5
GCGGGGC	40	2.1991582E-9	49.958824	5
GCGGGGA	80	0.0	49.958824	5
AACGTGT	20	3.968245E-4	49.958824	48
CAATGCT	20	3.968245E-4	49.958824	32
CAGTCTA	20	3.968245E-4	49.958824	20
TTGCAGG	20	3.968245E-4	49.958824	3
ATCTTTC	20	3.968245E-4	49.958824	10
AACAACG	20	3.968245E-4	49.958824	45
TAAACAA	20	3.968245E-4	49.958824	43
CCAGTCT	20	3.968245E-4	49.958824	19
CGGGGGG	40	2.1991582E-9	49.958824	6