SRR1526347_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526347_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	118668
Sequences flagged as poor quality	0
Sequence length	56
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	541	0.45589375400276405	No Hit
GGACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	460	0.3876360939764722	No Hit
GGACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	430	0.3623554791519196	No Hit
GGACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	310	0.2612330198537095	No Hit
GGACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	304	0.256176896888799	No Hit
GGACATGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	261	0.21994134897360706	No Hit
GGACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGCCTCAACGATTAAG	200	0.16853743216368355	No Hit
GGACATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	134	0.11292007954966797	No Hit
GGACATGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCGAACCTGCGTGCAATC	122	0.10280783361984697	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGACC	20	3.907112E-4	50.66009	38
TATTTCT	15	0.007987153	50.660088	38
TCACCGT	15	0.007987153	50.660088	40
CCGGATC	15	0.007987153	50.660088	40
ATTTGTT	15	0.007987153	50.660088	39
CACCGTG	15	0.008027906	50.594944	41
AATATTC	15	0.008123597	50.443592	37
GGTACTC	20	4.0414123E-4	50.31458	36
TATGCCT	115	0.0	50.31458	35
CGAATCT	15	0.008261768	50.228935	44
ATTATAT	15	0.008261768	50.228935	44
ATTCTAT	15	0.008261768	50.228935	44
CGAATAT	20	4.0841248E-4	50.207577	43
CCAGAAC	15	0.008275681	50.207573	43
CGGGTAT	15	0.008289611	50.186226	34
TTGGGAC	15	0.008289611	50.186226	34
CCACGAT	75	0.0	50.101025	46
CGATTTA	15	0.008345506	50.10102	49
CGATTCA	35	5.1526513E-8	50.10102	49
CGATTAA	125	0.0	50.10102	49