SRR1526344_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526344_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25284
Sequences flagged as poor quality	0
Sequence length	56
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACACTGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	79	0.31245056161999685	No Hit
GACACTGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCGAACCTGCGTGCAATC	31	0.12260718240784686	No Hit
GACACTGGGGCCGCATAGCCTCTCCACCCAAGCGGCCGGAGACCCTGCCTGCAATC	27	0.10678690080683437	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAAACCA	15	0.007960013	50.585514	39
CGACCCT	15	0.007960013	50.585514	40
GAGACCC	20	3.8755895E-4	50.58551	39
GATACCC	15	0.008087769	50.382767	35
AGAGCGC	15	0.008087769	50.382767	35
ATACCCA	15	0.008087769	50.382767	36
ATAGGAC	15	0.008152217	50.282	34
TGATACC	15	0.008152217	50.282	34
TAGAGCG	15	0.008152217	50.282	34
ATTCTGA	15	0.008152217	50.282	34
CGCTGCA	15	0.008217045	50.18164	44
CCCAGCC	15	0.008217045	50.18164	43
CCAGCCC	15	0.008217045	50.18164	44
GTCTTCA	15	0.008217045	50.18164	50
AAATGGT	15	0.008217045	50.18164	50
CTTCTCT	30	9.821597E-7	50.18164	44
TGAGTCG	20	4.0325962E-4	50.181633	50
CAGCCCC	15	0.008282256	50.081676	45
CAGTCTT	15	0.008282256	50.081676	48
GAAGAGC	15	0.008282256	50.081676	33