SRR1526343_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526343_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	142051
Sequences flagged as poor quality	0
Sequence length	56
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGGATGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	812	0.571625683733307	No Hit
TGGATGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	677	0.47658939395006017	No Hit
TGGATGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	555	0.39070474688668155	No Hit
TGGATGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	515	0.36254584621016395	No Hit
TGGATGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	410	0.28862873193430527	No Hit
TGGATGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	403	0.2837009243159147	No Hit
TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	368	0.2590618862239618	No Hit
TGGATGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	337	0.23723873819966068	No Hit
TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	290	0.20415202990475254	No Hit
TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	278	0.19570435970179723	No Hit
TGGATGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGCCTCAACGATTAAG	258	0.18162490936353845	No Hit
TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGACCACCCGACTGCTCTTC	197	0.13868258583184914	No Hit
TGGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTCCTCTTCC	193	0.13586669576419735	No Hit
TGGATGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTCCCTACCAAGCGC	170	0.11967532787519974	No Hit
TGGATGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTCAG	158	0.11122765767224446	No Hit
TGGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACCGCTCTTC	148	0.10418793250311507	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCTAAT	20	3.8871242E-4	50.719727	40
AGACTAC	15	0.008032736	50.592472	37
ACCCTAC	15	0.008032736	50.592472	41
TCTGAAA	15	0.008124212	50.447815	36
TGATACC	20	4.062617E-4	50.26816	34
ATATGCA	25	2.0133199E-5	50.26816	34
TAAAGTG	15	0.008239644	50.268158	34
TAGGATC	15	0.008239644	50.268158	34
AGATAGA	15	0.0082628755	50.232384	49
CGATTCA	75	0.0	50.232384	49
CGATTAA	135	0.0	50.232384	49
ACGATTA	135	0.0	50.19666	48
ACGATTC	80	0.0	50.196655	48
GTTCGCG	15	0.008286157	50.196655	48
TCATATG	15	0.008286157	50.196655	48
CTCATAT	15	0.008297815	50.17881	47
AACGATT	160	0.0	50.17881	47
CCCTACT	15	0.008309486	50.16098	42
TCCCACA	15	0.008309486	50.16098	42
TTGTGCA	15	0.008391524	50.03651	50