SRR1526342_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526342_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	40629
Sequences flagged as poor quality	0
Sequence length	56
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTGCGGGGATGAGATGGACTTAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	159	0.39134608284722733	No Hit
TGTGCGGGGATGAGATGGACTTAAATGAATTGACGGGTACGCCCAGTTCTGAGTCG	147	0.3618105294247951	No Hit
TGTGCGGGGATGAGATGGACTTAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	138	0.3396588643579709	No Hit
TGTGCGGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	136	0.3347362721208989	No Hit
TGTGCGGGGATGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	124	0.30520071869846666	No Hit
TGTGCGGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	123	0.3027394225799306	No Hit
TGTGCGGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	63	0.15506165546776932	No Hit
TGTGCGGGGACACGCAGGGATGAGATGGCCAAAAAAAAACCAAAAAAAAAAAAAAA	59	0.14521647099362525	No Hit
TGTGCGGGGATGAGATGGACTCAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	53	0.13044869428240913	No Hit
TGTGCGGGGATGAGATGGACTCAAATGAATTGACGGGTACGCCCAGTTCTGAGTCG	49	0.12060350980826504	No Hit
TGTGCGGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	46	0.11321962145265697	No Hit
TGTGCGGGGATGCGCTGGACTTAAAGGAATTGACGGGTCCGCCCAGTTCTGAGTCG	45	0.11075832533412094	No Hit
TGTGCGGGGATGCGCTGGACTTAAATGAATTGACGGGTCCGCCCAGTTCTGAGTCG	45	0.11075832533412094	No Hit
TGTGCGGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	41	0.10091314085997688	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAAACC	15	0.007987461	50.59825	38
TTCGTTT	15	0.007987461	50.59825	38
CCAGATG	15	0.007987461	50.59825	40
TCCGCCC	30	9.4193456E-7	50.59825	38
CCCTCCG	15	0.007987461	50.59825	39
TCCGACC	15	0.007987461	50.59825	38
TACTCAC	15	0.007987461	50.59825	38
CAAACCA	15	0.007987461	50.59825	39
CCGACCA	15	0.007987461	50.59825	39
CGACCAG	15	0.007987461	50.59825	40
GACCAGT	15	0.008027123	50.535	41
AAGAGCA	25	1.9693067E-5	50.346207	35
ACAGAAT	15	0.008268183	50.15881	42
TAGTTCT	15	0.008268183	50.15881	44
TCTTCTC	15	0.008268183	50.15881	43
CCAACAC	40	2.5011104E-9	50.158806	43
ACCAGTT	20	4.07144E-4	50.158806	42
CTCTGAG	15	0.008308877	50.096657	47
GTTCTTA	15	0.008308877	50.096657	46
TCTATTT	15	0.008308877	50.096657	46