SRR1526335_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526335_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	31338
Sequences flagged as poor quality	0
Sequence length	56
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	86	0.2744272129682813	No Hit
CTGTGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	65	0.20741591677835217	No Hit
CTGTGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	60	0.19146084625694046	No Hit
CTGTGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	41	0.13083157827557598	No Hit
CTGTGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	36	0.11487650775416428	No Hit
CTGTGTGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCATGGG	33	0.10530346544131725	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAACCAA	15	0.007915523	50.686176	40
AACTAAA	15	0.007915523	50.686176	38
TAAGCCC	15	0.0081214905	50.35864	36
GCGGCTC	15	0.008173599	50.277416	35
ACCGACT	20	4.0097415E-4	50.277416	42
TTGCCTA	20	4.0097415E-4	50.277416	42
TGCCTAG	20	4.0418567E-4	50.19646	43
CCAAAAC	65	0.0	50.196457	43
CCGTGCG	15	0.008278563	50.115753	47
GCAAGCA	15	0.008278563	50.115753	47
ATGAAGG	15	0.008278563	50.115753	48
TAGCAAG	25	2.0128273E-5	50.115753	47
ACCTGCG	15	0.008278563	50.115753	34
CTGCGCT	15	0.008278563	50.115753	49
CTAGCAA	25	2.0128273E-5	50.115753	46
CGTGCGC	15	0.008278563	50.115753	48
CGACCGT	15	0.008278563	50.115753	44
CCTATAT	20	4.1067E-4	50.035313	13
GCCTATA	20	4.1067E-4	50.035313	12
TGCCTAT	20	4.1067E-4	50.035313	11