SRR1526334_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526334_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	59308
Sequences flagged as poor quality	0
Sequence length	56
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGCGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	119	0.20064746745801576	No Hit
GGGCGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	105	0.1770418830511904	No Hit
GGGCGAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAA	75	0.12645848789370742	No Hit
GGGCGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	65	0.10959735617454643	No Hit
GGGCGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	64	0.10791124300263033	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCAACCA	45	1.1641532E-10	50.655235	39
CACACAC	15	0.007970276	50.65523	40
TTATTCT	15	0.007970276	50.65523	38
TAGTTTT	15	0.007970276	50.65523	39
CCTCATG	15	0.007970276	50.65523	40
TATTTAT	15	0.007970276	50.65523	38
CCTGTGC	20	3.9092917E-4	50.61182	41
TTATTTA	25	1.9690482E-5	50.395905	37
TTTATTC	20	3.9927804E-4	50.3959	37
CACACTG	15	0.008188907	50.31005	42
CCAACAC	90	0.0	50.31005	43
GCCTTGA	15	0.008188907	50.31005	42
GCCTAGC	45	1.2369128E-10	50.31005	44
TGCCTAG	45	1.2369128E-10	50.31005	43
TATTTTC	25	1.9890505E-5	50.31005	43
GTGCGTA	15	0.008188907	50.31005	44
CATACCT	15	0.008188907	50.31005	44
TGTGCGT	15	0.008188907	50.31005	43
CGACTCC	15	0.008188907	50.31005	44
CTTCTCT	55	0.0	50.31005	44