SRR1526330_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526330_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	56847
Sequences flagged as poor quality	0
Sequence length	56
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATGATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	336	0.5910602142593276	No Hit
CATGATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	264	0.4644044540609003	No Hit
CATGATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	264	0.4644044540609003	No Hit
CATGATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	204	0.3588579872288775	No Hit
CATGATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	163	0.2867345682269953	No Hit
CATGATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	161	0.2832163526659278	No Hit
CATGATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGCCTCAACGATTAAG	132	0.23220222703045015	No Hit
CATGATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	111	0.19526096363924217	No Hit
CATGATGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	71	0.12489665241789363	No Hit
CATGATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTCAG	67	0.1178602212957588	No Hit
CATGATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTCCTCTTCC	57	0.10026914349042165	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CACATCA	15	0.008029229	50.55814	41
ACCACTG	15	0.008029229	50.55814	39
AACCTTA	15	0.008029229	50.55814	41
TACGCCC	15	0.008029229	50.55814	38
TGCCCGT	35	4.8035872E-8	50.467857	37
GTACGCC	25	1.951375E-5	50.467857	37
TGCGTGA	15	0.008143531	50.377895	44
ATGCCCG	30	9.778723E-7	50.377895	36
ATGCTCG	15	0.008143531	50.377895	36
GCCGGCG	15	0.008172295	50.333035	42
GCGTTCA	15	0.008172295	50.333035	42
TATGCTT	160	0.0	50.288254	35
CGTTCAC	15	0.008230049	50.243557	43
CCAACAC	30	9.96095E-7	50.243557	43
TAAGAGA	15	0.008230049	50.243557	34
ATATGCT	180	0.0	50.243557	34
AATACAG	15	0.008230049	50.243557	34
CCTCAAA	25	2.003592E-5	50.243553	43
ATATGCG	20	4.0514738E-4	50.243553	34
TCCACGA	20	4.0871988E-4	50.154392	45