SRR1526329_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526329_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12952
Sequences flagged as poor quality	0
Sequence length	56
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGCTGCGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	23	0.1775787523162446	No Hit
GGCTGCGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGCCGTCGACCGTGCGCTT	15	0.11581222977146387	No Hit
GGCTGCGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGCTGTCGACCCTGCGCTT	14	0.10809141445336627	No Hit
GGCTGCGGGGATGAGATGGACTTAAAGGAATTGACGGGTCCGCACAGTTCTGAGTC	14	0.10809141445336627	No Hit
GGCTGCGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGCTGTCGACCGTGCGCTT	13	0.10037059913526869	No Hit
GGCTGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	13	0.10037059913526869	No Hit
GGCTGCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	13	0.10037059913526869	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTGCCT	15	0.008061199	50.284046	41
AGACCCT	15	0.008061199	50.284046	40
CGGAGAC	25	1.9084033E-5	50.284042	37
GGTTGGG	20	3.9954894E-4	50.08915	12
CCAAAAC	20	3.9954894E-4	50.08915	43
GGACTCT	15	0.00818663	50.08915	9
GAAGCTG	15	0.00818663	50.08915	9
GAAGCCT	20	3.9954894E-4	50.08915	9
TCTATTT	15	0.00818663	50.08915	46
TATTTTA	15	0.00818663	50.08915	43
TCTGAGT	15	0.00818663	50.08915	49
AGATGGT	15	0.00818663	50.08915	11
TTCTATT	15	0.00818663	50.08915	45
GTTGGGG	20	3.9954894E-4	50.08915	13
AAGCCTG	20	3.9954894E-4	50.08915	10
AGCTGGT	15	0.00818663	50.08915	11
TTGCCTA	15	0.00818663	50.08915	42
GGTCGAG	15	0.00818663	50.08915	13
GTAGAGC	20	4.0730918E-4	49.895756	33
TGGTAGA	20	4.0730918E-4	49.895756	31