SRR1526328_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526328_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	64843
Sequences flagged as poor quality	0
Sequence length	56
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TAGCATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	270	0.41639035824992676	No Hit
TAGCATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	169	0.2606295205342134	No Hit
TAGCATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	107	0.16501395678793393	No Hit
TAGCATGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	105	0.1619295837638604	No Hit
TAGCATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTCCCTACCAAGCGC	101	0.15576083771571334	No Hit
TAGCATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	86	0.13262804003516185	No Hit
TAGCATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	75	0.11566398840275743	No Hit
TAGCATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	71	0.10949524235461038	No Hit
TAGCATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	66	0.10178430979442654	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCTT	60	0.0	50.30625	35
TATGCCC	25	1.9919818E-5	50.30625	35
GTAAGCC	15	0.008194717	50.30625	35
ATACAAA	20	4.0308275E-4	50.30625	36
TACCCGT	15	0.008220079	50.26698	49
CACGATT	25	2.0012229E-5	50.26698	47
CGATTAA	30	9.950891E-7	50.26698	49
ACGATTA	30	9.950891E-7	50.26698	48
AAGATTA	60	0.0	50.26698	48
TGTACAT	15	0.008220079	50.26698	46
AAAGATT	60	0.0	50.26698	47
CATTTGA	20	4.0464132E-4	50.266975	46
AAGGACA	15	0.008245501	50.22777	45
GTAACTT	15	0.008245501	50.22777	45
CGACTCC	25	2.0104995E-5	50.227768	44
CCAAAAC	120	0.0	50.18862	43
TGATACA	20	4.1250617E-4	50.071537	34
TGATATG	20	4.156859E-4	49.993786	50
TCTATTA	20	4.156859E-4	49.993786	50
ATCTCAT	25	2.0764382E-5	49.955006	12