SRR1526327_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526327_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14685
Sequences flagged as poor quality	0
Sequence length	56
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCGCTAGGGTCCAGAGTTCTTTGTCATTACCTTTATGTTCCTTTATGCTGCTGGCT	38	0.2587674497786857	No Hit
CCGCTAGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	26	0.17705141300646918	No Hit
CCGCTAGGGATGAGATGGACTTAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	26	0.17705141300646918	No Hit
CCGCTAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	24	0.1634320735444331	No Hit
CCGCTAGGGATGAGATGGACTTAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	23	0.15662240381341505	No Hit
CCGCTAGGGTCCAGAGTTCTTTGTCATTACCTTTATGTTACTTTATGCTGCTGGCT	23	0.15662240381341505	No Hit
CCGCTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	22	0.149812734082397	No Hit
CCGCTAGGGCTCCTACTTGGATAACTGTGGTAATTCTAGCGCTAATACATGCCGAC	21	0.14300306435137897	No Hit
CCGCTAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	21	0.14300306435137897	No Hit
CCGCTAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCCCAGTTCTGAGTCG	20	0.1361933946203609	No Hit
CCGCTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTCCTCTTCC	18	0.12257405515832481	No Hit
CCGCTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	15	0.10214504596527069	No Hit
CCGCTAGGGGCCTTTTGTGACTGGCGGTGAACGAGTGCGCCGTGCCATGAAGGCCT	15	0.10214504596527069	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCCCAG	15	0.008054547	50.327587	40
GTACCCA	15	0.008054547	50.327587	37
ACCCACA	15	0.008054547	50.327587	39
TACCCAC	15	0.008054547	50.327587	38
GTTACTT	15	0.008054547	50.327587	37
CCGGAGA	15	0.008165465	50.15464	36
AGCTCTG	15	0.008165465	50.15464	45
CAGTTCT	30	9.57094E-7	50.15464	44
TATGCTG	20	3.9869142E-4	50.15464	44
TATGTTC	15	0.008165465	50.15464	34
TATGTTA	15	0.008165465	50.15464	34
GTTCTGA	30	9.57094E-7	50.15464	46
GGCCGGA	15	0.008165465	50.15464	34
TGCTGCT	20	3.9869142E-4	50.15464	46
TGTTACT	15	0.008165465	50.15464	36
AGAGCCC	15	0.008165465	50.15464	36
GCCGGAG	15	0.008165465	50.15464	35
ATGCTGC	20	3.9869142E-4	50.15464	45
ACCCTGC	25	1.9507124E-5	50.15464	42
TCTGAGT	35	4.7062713E-8	50.15464	48