SRR1526325_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526325_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	76142
Sequences flagged as poor quality	0
Sequence length	56
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	538	0.7065745580625673	No Hit
ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	447	0.5870610175724305	No Hit
ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	372	0.4885608468388012	No Hit
ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	316	0.41501405269102465	No Hit
ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	310	0.40713403903233436	No Hit
ACAATAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	239	0.31388721073783193	No Hit
ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGCCTCAACGATTAAG	227	0.29812718342045125	No Hit
ACAATAGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	175	0.22983373171180163	No Hit
ACAATAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	170	0.223267053662893	No Hit
ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGCCTCAAAGATTAAG	105	0.13790023902708098	No Hit
ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTCAG	93	0.1221402117097003	No Hit
ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTCAG	90	0.11820020488035513	No Hit
ACAATAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTCCCTACCAAGCGC	83	0.10900685561188307	No Hit
ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGCCTCAAAGATTAAG	82	0.10769352000210135	No Hit
ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCCACGATTAAG	79	0.10375351317275616	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCAACCT	45	1.1823431E-10	50.56446	40
AACAACC	25	1.9357416E-5	50.56446	38
CCGGAAC	15	0.00803585	50.56446	40
TTCGTTT	15	0.00803585	50.56446	38
GCGAACC	15	0.00803585	50.56446	39
CGCTAAT	20	3.9345934E-4	50.56446	40
TGCTTTT	25	1.9357416E-5	50.56446	39
GAACTCT	15	0.00803585	50.56446	39
GCGCTAA	20	3.9345934E-4	50.56446	39
CTACGCT	15	0.00803585	50.56446	40
CAAACCA	50	5.456968E-12	50.56446	39
CCTGTGC	35	4.811045E-8	50.496998	41
TACGCTC	15	0.008078412	50.496998	41
TGCTCGT	50	5.456968E-12	50.42971	37
CGGCTAA	15	0.008121141	50.42971	37
AGCGCTC	20	3.9868115E-4	50.42971	37
CAGAACT	20	3.9868115E-4	50.42971	37
TTTGCTT	20	3.9868115E-4	50.42971	37
ATGCTTG	220	0.0	50.396137	36
TCAGAAC	30	9.799205E-7	50.396137	36