SRR1526323_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526323_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	35592
Sequences flagged as poor quality	0
Sequence length	56
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	95	0.2669139132389301	No Hit
TTGGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	86	0.24162733198471567	No Hit
TTGGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	71	0.1994830298943583	No Hit
TTGGACGGGTACGCACAGTTCTGAGTCGGAGACACGCAGGCATGAGATGGGCAAAA	65	0.18262530905821533	No Hit
TTGGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	55	0.15452910766464373	No Hit
TTGGACGGGTACGCACAGTTCTGAGTCGGAGACACGCAGCCATGAGATGGCCAAAA	54	0.15171948752528658	No Hit
TTGGACGGGTACGCACAGTTCTGAGTCGGAGACACGCAGGCATGAGATGGCCAAAA	53	0.14890986738592943	No Hit
TTGGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	49	0.13767138682850077	No Hit
TTGGACGGGTACGCACAGTTCTGAGTCGGAGACACGCAGCCATGAGATGGGCAAAA	45	0.12643290627107215	No Hit
TTGGACGGGTACGCACAGTTCTGAGTCGGAGACACGCAGGCATGAGATGGGGAAAA	43	0.12081366599235784	No Hit
TTGGACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	42	0.11800404585300067	No Hit
TTGGACGGGTACGCACAGTTCTGAGTCGGAGACACGCAGCGATGAGATGGCCAAAA	39	0.1095751854349292	No Hit
TTGGACGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	36	0.10114632501685772	No Hit
TTGGACGGGTACGCACAGTTCTGAGTCGGAGACACGCAGGGATCAGATCGCCAAAA	36	0.10114632501685772	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCATGA	25	1.920792E-5	50.536377	39
CCGTCTC	20	3.9164588E-4	50.536377	40
CCCGTCT	20	3.9164588E-4	50.536377	39
GCTTGTC	25	1.920792E-5	50.536377	38
TTGTCTC	30	9.4653296E-7	50.536373	40
TTCGTTT	15	0.008018004	50.536373	38
GGATCAG	30	9.4653296E-7	50.536373	40
TCGTTTT	15	0.008018004	50.536373	39
GACCAGC	15	0.008018004	50.536373	41
CGTCTCA	30	9.4653296E-7	50.536373	41
TATGCTT	45	1.200533E-10	50.321026	35
TGCTTGT	25	1.9701109E-5	50.321026	37
ATGCTTG	45	1.200533E-10	50.321026	36
GCCCCAC	15	0.008154787	50.321022	37
TTTTCGT	15	0.008154787	50.321022	36
TGCTTGC	20	4.0001006E-4	50.321022	37
CAGCTCG	20	4.0282944E-4	50.249645	44
CTCCACG	20	4.0282944E-4	50.249645	44
ACCAACA	15	0.008200766	50.249645	42
CAACACA	20	4.0282944E-4	50.249645	44