SRR1526321_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526321_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	49861
Sequences flagged as poor quality	0
Sequence length	56
%GC	56

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACGAGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	255	0.5114217524718718	No Hit
ACGAGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	251	0.503399450472313	No Hit
ACGAGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	180	0.3610035899801448	No Hit
ACGAGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	175	0.35097571248069637	No Hit
ACGAGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	171	0.34295341048113753	No Hit
ACGAGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGCCTCAACGATTAAG	104	0.2085798519885281	No Hit
ACGAGCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	79	0.15844046449128577	No Hit
ACGAGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGCCTCAAAGATTAAG	71	0.14239586049216824	No Hit
ACGAGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	67	0.13437355849260946	No Hit
ACGAGCGGGCTCCTACTTGGATAACTGTGGTAATTCTAGCGCTAATACATGCCGAC	59	0.11832895449349191	No Hit
ACGAGCGGGGGGCCGATCGCACGCCCCCCGTGGCGGCGACCACCCATTCGAACGTC	54	0.10830107699404344	No Hit
ACGAGCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	53	0.10629550149415376	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCCGTC	20	3.8599322E-4	50.72569	38
AATTCCC	15	0.008048076	50.51886	35
CTCGCCT	15	0.008048076	50.51886	41
AACGATT	50	5.456968E-12	50.211754	47
CCTGCCG	15	0.008244701	50.211754	48
GCGTGTT	15	0.008244701	50.211754	48
AAGATTC	20	4.059254E-4	50.211754	48
TATCTCA	15	0.008244701	50.211754	48
TTTGGTA	15	0.008244701	50.211754	46
TTGGTAT	15	0.008244701	50.211754	47
ACGATTC	25	2.0074782E-5	50.211754	48
TACCAAG	20	4.059254E-4	50.211754	47
CGATTCA	25	2.0074782E-5	50.211754	49
GTTTGGT	15	0.008277816	50.16093	45
AATTATC	15	0.008277816	50.16093	45
TCAACGA	50	7.2759576E-12	50.16093	45
AATCACT	15	0.0083110295	50.110214	50
CAAACAA	15	0.0083110295	50.110214	50
ATGATTT	25	2.0439331E-5	50.059597	33
GTGTGGC	20	4.120618E-4	50.059597	33