SRR1526320_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526320_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	65464
Sequences flagged as poor quality	0
Sequence length	56
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTATTGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	106	0.1619210558474887	No Hit
CGTATTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	97	0.14817304167175852	No Hit
CGTATTGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGCTGTCGACCGTGCGCTT	83	0.12678724184284493	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAACCT	15	0.00788335	50.801716	39
ATCCTAC	15	0.007981219	50.643578	37
AGCCCTT	25	1.9148498E-5	50.643578	37
CGGCCAA	30	9.452069E-7	50.643578	37
AGACAAC	15	0.007981219	50.643578	37
AGAGATC	15	0.007981219	50.643578	37
GTACGCC	15	0.007981219	50.643578	37
AAACTCA	15	0.008104823	50.447285	36
CCGGCCA	35	4.834328E-8	50.447285	36
GACTTCA	15	0.008179665	50.33024	34
CCAACAC	75	0.0	50.213737	43
CTAATCG	15	0.008280253	50.17502	49
TTTACAA	15	0.008305543	50.13636	45
CAACGAT	25	2.0325622E-5	50.13636	46
AACTTCA	15	0.008305543	50.13636	47
TTATATT	15	0.008305543	50.13636	45
ACGATTA	25	2.0325622E-5	50.13636	48
TATCTCA	15	0.008305543	50.13636	48
AACGATT	25	2.0325622E-5	50.13636	47
CATTTGA	15	0.008305543	50.13636	46