SRR1526318_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526318_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	36617
Sequences flagged as poor quality	0
Sequence length	56
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCAAAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	157	0.4287625966081328	No Hit
TCAAAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	136	0.3714121855968539	No Hit
TCAAAGGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	85	0.2321326159980337	No Hit
TCAAAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTCCCTACCAAGCGC	67	0.18297512084550893	No Hit
TCAAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	63	0.17205123303383674	No Hit
TCAAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGACCACCCGACTGCTCTTC	60	0.16385831717508262	No Hit
TCAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	59	0.16112734522216457	No Hit
TCAAAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	52	0.14201054155173828	No Hit
TCAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	47	0.12835568178714807	No Hit
TCAAAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	40	0.10923887811672174	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCAACAA	15	0.007967003	50.620834	39
TTCGTTT	20	3.8857397E-4	50.620834	38
ACCCGAT	15	0.007967003	50.620834	41
CAACAAA	20	3.8857397E-4	50.620834	40
TACGCCC	20	3.8857397E-4	50.620834	38
CCCTGGA	15	0.007967003	50.620834	41
GCTCCCC	15	0.007967003	50.620834	40
GCCCTTG	15	0.007967003	50.620834	38
GTACGCC	20	3.9394418E-4	50.480614	37
CCAACAC	25	1.9505092E-5	50.41079	43
TGCCTAG	35	4.782305E-8	50.410786	43
GCAGCAT	20	3.993732E-4	50.34116	42
CCCGATT	15	0.008143763	50.34116	42
TTGCCTA	35	4.8350557E-8	50.34116	42
TCCCCCA	20	3.993732E-4	50.34116	42
CGACTCC	35	4.8881702E-8	50.27173	44
GTCGCGG	15	0.008188405	50.271725	36
TATGCTT	15	0.008188405	50.271725	35
CAACACA	30	9.823852E-7	50.271725	44
ATGCTTG	15	0.008188405	50.271725	36