SRR1526317_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526317_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	102920
Sequences flagged as poor quality	0
Sequence length	56
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AACGCCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	242	0.23513408472600078	No Hit
AACGCCGGGATGAGATGGACTTAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	219	0.21278663039253787	No Hit
AACGCCGGGATGAGATGGACTTAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	217	0.21084337349397592	No Hit
AACGCCGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	201	0.19529731830547997	No Hit
AACGCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	188	0.18266614846482707	No Hit
AACGCCGGGATGAGATGGACTTAAATGAATTGACGGGTACGCCCAGTTCTGAGTCG	184	0.17877963466770308	No Hit
AACGCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	178	0.17294986397201711	No Hit
AACGCCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	170	0.16517683637776914	No Hit
AACGCCGGGATGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	165	0.16031869413136418	No Hit
AACGCCGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	164	0.15934706568208318	No Hit
AACGCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	161	0.1564321803342402	No Hit
AACGCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGACCACCCGACTGCTCTTC	144	0.13991449669646328	No Hit
AACGCCGGGATGAGATGGACTCAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	103	0.10007773027594247	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGACGA	15	0.008186354	50.34071	36
TAAGACG	15	0.008202285	50.31597	35
TGATACC	15	0.008266239	50.217266	34
AGAATTC	15	0.008266239	50.217266	34
TCGCCTA	30	1.0146778E-6	50.168056	42
TATTATA	15	0.008298355	50.168056	49
GAAATTA	15	0.008330564	50.118942	47
TTCTAAT	15	0.008330564	50.118942	47
CTGTACG	15	0.008330564	50.118942	44
TCTAATC	15	0.008330564	50.118942	48
CTTGCGA	15	0.008330564	50.118942	45
TATACTA	15	0.008330564	50.118942	44
GCGTCAC	15	0.008330564	50.118942	43
ACGGGGC	15	0.008427748	49.972183	33
ACGGATA	20	4.1773866E-4	49.972183	33
ACGGTCA	35	5.2492396E-8	49.972183	33
CGGTAGG	25	2.0869198E-5	49.947807	31
AACGTAA	15	0.008444027	49.947803	30
CATATCT	15	0.008444027	49.947803	27
TATGCTG	15	0.008444027	49.947803	25