SRR1526316_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526316_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	57631
Sequences flagged as poor quality	0
Sequence length	56
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAA	163	0.2828338914820149	No Hit
AAAACGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	95	0.16484183859381235	No Hit
AAAACGGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	93	0.1613714840971005	No Hit
AAAACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAA	71	0.12319758463327028	No Hit
AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	71	0.12319758463327028	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAAACC	45	1.09139364E-10	50.981304	38
TTAATTT	45	1.09139364E-10	50.981304	38
TAAACCA	15	0.007769172	50.9813	39
TTAGTTT	15	0.007769172	50.9813	38
TTATTTA	15	0.007934779	50.710365	37
TTTAGTT	15	0.007934779	50.710365	37
TTATTTC	25	1.8970106E-5	50.71036	37
CCGGACA	15	0.008074779	50.486774	36
AAGACCA	20	3.9563474E-4	50.486774	36
TAAGACC	20	3.9736225E-4	50.44229	35
TCCTTCA	15	0.00813129	50.39789	42
CCAACAC	45	1.2187229E-10	50.39789	43
CCTTCTA	15	0.00813129	50.39789	43
AGAATAT	15	0.008188095	50.30932	44
CTTCTAT	25	1.9884441E-5	50.30931	44
TTCAAGC	15	0.008245194	50.221054	34
GTAAGAC	15	0.008245194	50.221054	34
TAGAGCG	30	9.994146E-7	50.221054	34
AAGGAAC	15	0.008245194	50.221054	34
TGATACA	25	2.0092504E-5	50.22105	34