SRR1526315_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526315_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	76470
Sequences flagged as poor quality	0
Sequence length	56
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCGAATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	190	0.24846344971884401	No Hit
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	145	0.18961684320648622	No Hit
GCGAATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	144	0.18830914083954492	No Hit
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	129	0.16869360533542566	No Hit
GCGAATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	128	0.16738590296848438	No Hit
GCGAATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	125	0.16346279586766052	No Hit
GCGAATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	118	0.15430887929907153	No Hit
GCGAATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	90	0.11769321302471558	No Hit
GCGAATGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	90	0.11769321302471558	No Hit
GCGAATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	86	0.11246240355695045	No Hit
GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	78	0.10200078462142016	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTGTCG	15	0.007980742	50.652664	39
TGCCCGT	20	3.9656207E-4	50.484386	37
TATGCCT	15	0.008193334	50.317215	35
TTATTCC	15	0.008193334	50.317215	35
CACGTCG	15	0.008214822	50.283916	49
TCGCCTA	30	9.99742E-7	50.25066	42
ACAACAC	15	0.008236352	50.25066	43
CCGATTG	15	0.008236352	50.25066	44
ACCATAT	15	0.008236352	50.25066	48
GCACGTC	15	0.008236352	50.25066	48
CACGATT	15	0.008236352	50.25066	47
CGATTGC	15	0.008236352	50.25066	45
CACGACT	15	0.008236352	50.25066	42
CCGTCAC	15	0.008236352	50.25066	43
CCGAATC	20	4.0575876E-4	50.25066	43
ACCCGAT	15	0.008236352	50.25066	42
CGTCACA	15	0.008236352	50.25066	44
TCGAATC	15	0.008236352	50.25066	43
ATCGAAT	15	0.008236352	50.25066	42
CCCGATT	15	0.008236352	50.25066	43