SRR1526312_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526312_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	48208
Sequences flagged as poor quality	0
Sequence length	56
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTACAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	131	0.2717391304347826	No Hit
GGTACAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	118	0.2447726518420179	No Hit
GGTACAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	91	0.1887653501493528	No Hit
GGTACAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTCCTCTTCC	73	0.1514271490209094	No Hit
GGTACAGGGATGAGATGGACTTAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	68	0.14105542648523067	No Hit
GGTACAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGACCACCCGACTGCTCTTC	64	0.1327580484566877	No Hit
GGTACAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	59	0.12238632592100895	No Hit
GGTACAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCCCAGTTCTGAGTCG	55	0.11408894789246599	No Hit
GGTACAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTT	51	0.105791569863923	No Hit
GGTACAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	51	0.105791569863923	No Hit
GGTACAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGCCCACCCGACTGCTCTT	50	0.10371722535678725	No Hit
GGTACAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	49	0.10164288084965152	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCCCA	40	2.3192115E-9	50.624737	39
TACGCCC	40	2.3192115E-9	50.624737	38
CTGTCTC	15	0.007979994	50.624737	40
CGGACAA	15	0.008013442	50.57128	37
TGTCTCA	20	3.9172094E-4	50.571278	41
GTACGCC	45	1.1641532E-10	50.571278	37
TATGCCT	15	0.008148281	50.35857	35
ATGCCTG	15	0.008148281	50.35857	36
GTAAGCA	15	0.008148281	50.35857	35
GGTAAGC	20	4.0205452E-4	50.30567	34
CCTGAAC	15	0.008250511	50.20021	43
CCAAGAC	15	0.008250511	50.20021	43
ACAGTTC	85	0.0	50.20021	43
CTGAACG	15	0.0082848	50.147648	44
CATATGC	45	1.2732926E-10	50.147644	33
CAACACA	20	4.0835785E-4	50.14764	44
TCAAAGA	35	5.0293238E-8	50.14764	45
AAAGATT	35	5.0293238E-8	50.14764	47
GTGGCAA	15	0.008423013	49.93848	30
CGATGGA	15	0.008423013	49.93848	13