SRR1526311_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526311_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22737
Sequences flagged as poor quality	0
Sequence length	56
%GC	60

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATCCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	84	0.3694418788758412	No Hit
CATCCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	83	0.36504376127017635	No Hit
CATCCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGACCACCCGACTGCTCTTC	76	0.3342569380305229	No Hit
CATCCCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	76	0.3342569380305229	No Hit
CATCCCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	72	0.3166644676078639	No Hit
CATCCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	62	0.27268329155121607	No Hit
CATCCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACCGCTCTTC	40	0.175924704226591	No Hit
CATCCCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTCCCTACCAAGCGC	37	0.16273035140959669	No Hit
CATCCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTCCTCTTCC	36	0.15833223380393194	No Hit
CATCCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGTTCTTCC	34	0.14953599859260236	No Hit
CATCCCGGGGACTTAAGCCAGCACTGCTGTGCGGGGCTCTGGCTGCGCCTGGTCTG	23	0.10115670493028985	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAACCAA	15	0.0078818165	50.694386	40
CCCCGAC	20	3.8259174E-4	50.694386	41
GCTTGCC	15	0.0078818165	50.694386	40
AAAAACC	15	0.0078818165	50.694386	38
CTCGCCT	15	0.0078818165	50.694386	41
CTTGCCT	25	1.8631874E-5	50.694378	41
CCCCCGA	25	1.8631874E-5	50.694378	40
GGACTGG	15	0.008023253	50.467564	37
GCGGTCC	15	0.008023253	50.467564	37
ACCAAGC	20	3.9119113E-4	50.467564	48
TAGCAAG	35	4.630965E-8	50.46756	47
CTAGCAA	35	4.630965E-8	50.46756	46
AGCAAGC	35	4.630965E-8	50.46756	48
CAAGCAT	25	1.9135636E-5	50.46756	49
TAGGACT	20	3.9554804E-4	50.354916	35
TCTGCGA	15	0.008094675	50.35491	45
CCTAGCA	35	4.713911E-8	50.354908	45
ATTTCAA	25	1.9391717E-5	50.354908	45
AATTTCA	15	0.008166568	50.242764	44
GTAAGAC	20	3.999434E-4	50.242764	34