SRR1526310_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526310_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	33847
Sequences flagged as poor quality	0
Sequence length	56
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTGAGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	106	0.31317398883209735	No Hit
ACCTGAGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCGAACCTGCGTGCAATC	56	0.1654504091943156	No Hit
ACCTGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	50	0.14772357963778177	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCAACCA	20	3.8548693E-4	50.6908	39
ATCTATC	15	0.007918105	50.6908	38
TTATTCT	20	3.8548693E-4	50.6908	38
ACCAACC	15	0.007918105	50.6908	38
AACTAAA	20	3.8548693E-4	50.6908	38
TATTCTT	20	3.8548693E-4	50.6908	39
GCCAACC	20	3.8548693E-4	50.6908	39
AAACTAA	20	3.9127673E-4	50.538345	37
CATCTAT	15	0.008013158	50.538345	37
TTTATTC	20	3.9127673E-4	50.538345	37
CCATCTA	15	0.008157325	50.31138	36
CCAAAAC	65	0.0	50.161194	43
TTATCTT	15	0.008254503	50.161194	45
TATCTTT	20	4.06054E-4	50.161194	46
CCTTCTC	30	9.951091E-7	50.161194	43
CAGCTCT	15	0.0083525395	50.011906	44
AGAATAT	15	0.0083525395	50.011906	44
TGCACTC	30	1.0263848E-6	49.937595	50
CCGTGGA	15	0.008401881	49.937595	30
GCCTCCA	15	0.008401881	49.937595	32