SRR1526309_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526309_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	32007
Sequences flagged as poor quality	0
Sequence length	56
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGCGGAGGGATGAGATGGACTTAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	167	0.5217608648108226	No Hit
TGCGGAGGGATGAGATGGACTTAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	162	0.5061392820320555	No Hit
TGCGGAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCCCAGTTCTGAGTCG	140	0.43740431780548	No Hit
TGCGGAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	137	0.4280313681382198	No Hit
TGCGGAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	133	0.41553410191520607	No Hit
TGCGGAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	119	0.371793670134658	No Hit
TGCGGAGGGATGAGATGGACTCAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	97	0.3030587059080826	No Hit
TGCGGAGGGATGAGATGGACTCAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	94	0.2936857562408223	No Hit
TGCGGAGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	76	0.2374480582372606	No Hit
TGCGGAGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	74	0.23119942512575373	No Hit
TGCGGAGGGATGAGATGGACTCAAATGAATTGACGGGTACGCCCAGTTCTGAGTCG	65	0.2030805761239729	No Hit
TGCGGAGGGATGCGCTGGACTTAAAGGAATTGACGGGTCCGCCCAGTTCTGAGTCG	61	0.19058330990095915	No Hit
TGCGGAGGGATGCGCTGGACTTAAATGAATTGACGGGTCCGCCCAGTTCTGAGTCG	58	0.18121036023369888	No Hit
TGCGGAGGGATGAGATGGACTCAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	56	0.17496172712219202	No Hit
TGCGGAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAA	44	0.13746992845315087	No Hit
TGCGGAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAA	41	0.12809697878589058	No Hit
TGCGGAGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGCTGTCGACCCTGCGCTT	34	0.10622676289561658	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCCTAT	15	0.007945813	50.639553	38
TCCGGCC	15	0.007945813	50.639553	38
GCCCTTG	15	0.007945813	50.639553	38
TCCGCCC	70	0.0	50.63955	38
CACTGAC	15	0.007996145	50.558918	41
TCAAGAC	15	0.008046714	50.47854	34
GTCAACA	15	0.008046714	50.47854	36
CGGTCAA	15	0.008046714	50.47854	34
CGATCCT	20	3.9324068E-4	50.47854	36
TGCAATC	20	4.0261226E-4	50.238926	50
ACGGGTC	100	0.0	50.238926	33
ACTGACT	15	0.008199846	50.238922	42
TTCGATG	15	0.008199846	50.238922	50
GCCAGTT	15	0.008199846	50.238922	42
GCTGAGT	20	4.0577524E-4	50.15956	48
GTGCAAT	15	0.008251369	50.159557	49
ACTTTCG	15	0.008251369	50.159557	47
CGTGCGC	15	0.008251369	50.159557	48
CGTGCAA	15	0.008251369	50.159557	48
GCTCTGA	25	2.0032676E-5	50.159557	46