SRR1526308_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526308_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	42992
Sequences flagged as poor quality	0
Sequence length	56
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGATCAGGGATGAGATGGACTTAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	218	0.5070710829921845	No Hit
TGATCAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	203	0.47218087085969485	No Hit
TGATCAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	183	0.4256605880163751	No Hit
TGATCAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	180	0.41868254558987716	No Hit
TGATCAGGGATGAGATGGACTTAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	176	0.40937848902121327	No Hit
TGATCAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCCCAGTTCTGAGTCG	159	0.3698362486043915	No Hit
TGATCAGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	114	0.2651656122069222	No Hit
TGATCAGGGATGAGATGGACTCAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	101	0.23492742835876443	No Hit
TGATCAGGGATGAGATGGACTCAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	93	0.21631931522143655	No Hit
TGATCAGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	84	0.1953851879419427	No Hit
TGATCAGGGATGAGATGGACTCAAATGAATTGACGGGTACGCCCAGTTCTGAGTCG	78	0.18142910308894677	No Hit
TGATCAGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	78	0.18142910308894677	No Hit
TGATCAGGGATGCGCTGGACTTAAATGAATTGACGGGTCCGCCCAGTTCTGAGTCG	71	0.1651470040937849	No Hit
TGATCAGGGATGCGCTGGACTTAAAGGAATTGACGGGTCCGCCCAGTTCTGAGTCG	69	0.16049497580945293	No Hit
TGATCAGGGATGAGATGGACTCAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	66	0.15351693338295497	No Hit
TGATCAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	48	0.11164867882396724	No Hit
TGATCAGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCGAACCTGCGTGCAATC	45	0.10467063639746929	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTAAAA	20	3.884566E-4	50.644127	39
ACCTGTG	15	0.007961928	50.644127	40
ACACAGT	15	0.007961928	50.644127	41
ACTTCCA	15	0.007961928	50.644127	39
AACTAAA	20	3.884566E-4	50.644127	38
AGACCCT	15	0.007961928	50.644127	40
GACCTGT	15	0.007961928	50.644127	39
TTAATTA	15	0.007961928	50.644127	41
TACTCAC	15	0.007961928	50.644127	38
CCGACCA	15	0.007961928	50.644127	39
GAGACCC	15	0.007961928	50.644127	39
AAACTAA	20	3.9074113E-4	50.584126	37
ATACGCC	20	3.9074113E-4	50.584126	37
GTCCGAC	15	0.007999393	50.58412	37
GTACACA	15	0.007999393	50.58412	37
CGGCCAA	25	1.9168287E-5	50.58412	37
GGTCCGA	15	0.008112576	50.40496	36
GGTACTC	15	0.008112576	50.40496	36
GATACGC	25	1.9576091E-5	50.404957	36
GGATACG	25	1.9713612E-5	50.34552	35