SRR1526306_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526306_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	30441
Sequences flagged as poor quality	0
Sequence length	56
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCTAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAA	86	0.282513715055353	No Hit
GCCTAGGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	86	0.282513715055353	No Hit
GCCTAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	84	0.27594362865871686	No Hit
GCCTAGGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCGAACCTGCGTGCAATC	59	0.19381754870076542	No Hit
GCCTAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	47	0.15439703032094873	No Hit
GCCTAGGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGACAACCTGCGTGCAATC	33	0.10840642554449591	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGACCCT	35	4.7593858E-8	50.39268	40
ACTAAAA	15	0.008097543	50.392677	39
ACCAACC	15	0.008097543	50.392677	38
AACTAAA	15	0.008097543	50.392677	38
CCAACCA	20	3.962726E-4	50.392673	39
GAGCGCT	20	3.9954757E-4	50.30897	36
GATACCC	20	3.9954757E-4	50.30897	35
TACCCAA	20	3.9954757E-4	50.30897	37
AAACTAA	15	0.008151063	50.308968	37
AAAACTA	15	0.008151063	50.308968	36
AGCCCTT	15	0.008151063	50.308968	37
TAGAGCC	25	1.9854733E-5	50.22554	34
AAGGTGC	15	0.008204845	50.225536	34
AGAATAT	15	0.00825889	50.142384	44
GCAGCAT	15	0.00825889	50.142384	42
ATAGAAT	15	0.00825889	50.142384	42
ACCAACA	40	2.4738256E-9	50.14238	42
CAACACA	45	1.2369128E-10	50.14238	44
TTGCCTA	20	4.0616203E-4	50.14238	42
CCAACAC	35	5.016227E-8	50.059505	43