SRR1526305_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526305_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	38258
Sequences flagged as poor quality	0
Sequence length	56
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTCATAGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	139	0.36332270374823566	No Hit
TTCATAGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCGAACCTGCGTGCAATC	85	0.22217575409064771	No Hit
TTCATAGGGATGAGATGGACTTAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	72	0.18819593287678393	No Hit
TTCATAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	69	0.1803544356735846	No Hit
TTCATAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	60	0.15682994406398662	No Hit
TTCATAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCCCAGTTCTGAGTCG	59	0.15421611166292018	No Hit
TTCATAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	59	0.15421611166292018	No Hit
TTCATAGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCATGGG	58	0.15160227926185374	No Hit
TTCATAGGGATGAGATGGACTTAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	56	0.14637461445972086	No Hit
TTCATAGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGACAACCTGCGTGCAATC	56	0.14637461445972086	No Hit
TTCATAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	56	0.14637461445972086	No Hit
TTCATAGGGGCCGCATAGCCTCTCCACCCAAGCGGCCGGAGACCCTGCCTGCAATC	48	0.12546395525118928	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAAACC	25	1.9467661E-5	50.43444	38
TTCGTTT	25	1.9467661E-5	50.43444	38
ACCACAA	15	0.008087063	50.43444	39
AACTAAA	15	0.008087063	50.43444	38
CTAAAAA	15	0.008087063	50.43444	40
CCAACCA	20	3.9595983E-4	50.434437	39
ACGCCCA	40	2.3756002E-9	50.434437	39
CCCACAG	20	3.9595983E-4	50.434437	40
TACGCCC	40	2.3756002E-9	50.434437	38
ACCCACA	20	3.9595983E-4	50.434437	39
TACCCAC	20	3.9595983E-4	50.434437	38
TTTCGTT	25	1.9621199E-5	50.36773	37
GTACCCA	20	3.9856124E-4	50.367725	37
GTCCGCC	20	3.9856124E-4	50.367725	37
TACCCAT	15	0.008129568	50.367725	37
TCACAGT	15	0.008129568	50.367725	41
ATACAAA	15	0.008129568	50.367725	36
GGCCGGC	35	4.92455E-8	50.23483	34
CGGGTCC	30	9.885825E-7	50.23483	34
TAGAGCG	15	0.008215076	50.23483	34