SRR1526304_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526304_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	43152
Sequences flagged as poor quality	0
Sequence length	56
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	169	0.39163885799035963	No Hit
CTCCATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	136	0.3151649981460882	No Hit
CTCCATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	112	0.25954764553207266	No Hit
CTCCATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	91	0.21088246199480903	No Hit
CTCCATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	89	0.20624768261030776	No Hit
CTCCATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	89	0.20624768261030776	No Hit
CTCCATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	76	0.1761216166110493	No Hit
CTCCATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	73	0.16916944753429736	No Hit
CTCCATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGCCTCAACGATTAAG	73	0.16916944753429736	No Hit
CTCCATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	46	0.10659992584352986	No Hit
CTCCATGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGCTGTCGACCGTGCGCTT	44	0.10196514645902854	No Hit
CTCCATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	44	0.10196514645902854	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATAGAA	15	0.0079910625	50.597874	41
AAGCCAT	15	0.008065951	50.47882	37
TAAGAGA	20	4.017517E-4	50.301292	34
ATATGCC	35	4.8928996E-8	50.301292	34
CAGGGCC	15	0.008179261	50.30129	34
GTGCCCA	15	0.008179261	50.30129	35
ACGATTA	35	4.9385562E-8	50.242386	48
CGATTAA	35	4.9385562E-8	50.242386	49
AACGATT	40	2.4974725E-9	50.183628	47
GACCGCT	20	4.0643185E-4	50.183628	46
ATAGAAT	20	4.0643185E-4	50.183628	42
CAGCAAA	15	0.008255457	50.183624	47
TTCTCAT	15	0.008255457	50.183624	42
CTTTTAT	15	0.008332178	50.06651	44
TAGCGCC	15	0.008332178	50.06651	44
CCTCGCC	15	0.008332178	50.06651	44
TCTTCCA	15	0.008332178	50.06651	50
CAGTAGC	135	0.0	49.949944	27
GTGTCTC	15	0.008409429	49.94994	25
TGTCTCC	15	0.008409429	49.94994	26