SRR1526303_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526303_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	53624
Sequences flagged as poor quality	0
Sequence length	56
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTAACTGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	148	0.2759958227659257	No Hit
TTAACTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	72	0.13426823810234223	No Hit
TTAACTGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCGAACCTGCGTGCAATC	66	0.12307921826048038	No Hit
TTAACTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	65	0.12121438162017008	No Hit
TTAACTGGGCTCGTCTTAATCAGCAACATCTTTTGATACCCAAAAAAAAAAAAAAA	57	0.1062956884976876	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCCCCG	25	1.9285615E-5	50.561554	39
GCACCGA	15	0.008024632	50.56155	40
TTCGCCG	15	0.008176082	50.32328	36
ATATTTT	15	0.008298764	50.134274	47
CTGCAAT	25	2.0280879E-5	50.134274	49
ACCAACA	60	0.0	50.087242	42
CTCAGGC	15	0.008329648	50.087242	42
TCCTCCA	15	0.008391671	49.993446	50
GATATGG	20	4.150557E-4	49.993446	50
TTAAAAG	15	0.008391671	49.993446	33
GAGGAAT	25	2.085194E-5	49.9	20
CTCTCAT	20	4.1891172E-4	49.9	12
CGTGGTA	20	4.1891172E-4	49.9	14
GAATACC	25	2.085194E-5	49.9	23
TTTTGAA	15	0.008454037	49.899998	31
CCGCAGG	15	0.008454037	49.899998	28
TCTACCT	15	0.008454037	49.899998	11
GCGCCAT	15	0.008454037	49.899998	24
AGGCTAT	15	0.008454037	49.899998	20
GAATTCC	15	0.008454037	49.899998	12