SRR1526302_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526302_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	91594
Sequences flagged as poor quality	0
Sequence length	56
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TAGAGAGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	128	0.13974714500949845	No Hit
TAGAGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	123	0.13428827215756492	No Hit
TAGAGAGGGATGAGATGGACTTAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	121	0.1321047230167915	No Hit
TAGAGAGGGATGAGATGGACTTAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	118	0.12882939930563136	No Hit
TAGAGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	114	0.12446230102408455	No Hit
TAGAGAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCCCAGTTCTGAGTCG	108	0.11791165360176431	No Hit
TAGAGAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	107	0.11681987903137761	No Hit
TAGAGAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	104	0.11354455532021747	No Hit
TAGAGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	103	0.11245278074983077	No Hit
TAGAGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	102	0.11136100617944408	No Hit
TAGAGAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	94	0.10262680961635041	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCCCA	105	0.0	50.47535	39
TTAATTA	15	0.008097446	50.475346	41
CGACCAG	15	0.008097446	50.475346	40
CACCTGA	15	0.008097446	50.475346	41
CCTCCTT	15	0.008097446	50.475346	40
ATACCCG	15	0.008097446	50.475346	39
TAACCAC	15	0.008115206	50.447395	38
ACAGACC	15	0.008115206	50.447395	38
TTCATCC	15	0.008186541	50.33591	37
TTATTTC	25	1.9916573E-5	50.33591	37
TTCACCT	15	0.008240346	50.25262	36
TGAGTCT	15	0.008240346	50.25262	36
TATGCCT	20	4.0833023E-4	50.197243	35
AACGATT	45	1.2914825E-10	50.169605	47
CGATTCA	15	0.008294415	50.1696	49
CACTGAG	15	0.008294415	50.1696	49
GCTGAAT	20	4.0944264E-4	50.1696	49
TAATTAT	15	0.008294415	50.1696	42
CTCATCA	15	0.008294415	50.1696	44
ATATGCC	40	2.570232E-9	50.14199	34