SRR1526301_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526301_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	58215
Sequences flagged as poor quality	0
Sequence length	56
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
CCAGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	135	0.23189899510435455	No Hit
CCAGACGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	96	0.1649059520742077	No Hit
CCAGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	92	0.15803487073778236	No Hit
CCAGACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	81	0.13913939706261272	No Hit
CCAGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	76	0.13055054539208108	No Hit
CCAGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	70	0.1202439233874431	No Hit
CCAGACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	69	0.11852615305333676	No Hit
CCAGACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	67	0.11509061238512411	No Hit
CCAGACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	64	0.10993730138280512	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCCGTA	20	3.932533E-4	50.549652	38
AGGGATC	20	3.932533E-4	50.549652	38
CCGTACG	20	3.932533E-4	50.549652	40
CCGTCTC	15	0.008035653	50.54965	40
GATCACC	15	0.008035653	50.54965	38
TTGGTTT	15	0.008035653	50.54965	38
CCCCATT	15	0.008035653	50.54965	40
TGCCTGT	15	0.008091204	50.46174	37
CAGGCAT	20	3.9665136E-4	50.46174	37
GACCCGT	20	3.9665136E-4	50.46174	37
AAGATCA	15	0.008175063	50.33044	36
TATGCCT	20	4.0351745E-4	50.286827	35
CTCCACG	20	4.1047763E-4	50.11313	44
GTGCGTA	20	4.1047763E-4	50.11313	44
TCTCAAC	20	4.1047763E-4	50.11313	43
CCTAAAC	15	0.0083162645	50.113125	43
CTTATAT	15	0.0083162645	50.113125	44
CGATTAA	25	2.0458265E-5	50.06989	49
ACTCCTC	40	2.5956979E-9	50.026726	46
ACCAAGC	25	2.0563117E-5	50.026726	48