SRR1526300_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526300_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	67530
Sequences flagged as poor quality	0
Sequence length	56
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGGAGGGGACACGCAGGGATGAGATGGCCAAAAAAAAACCAAAAAAAAAAAAAAA	146	0.2162002073152673	No Hit
GAGGAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	121	0.17917962387087222	No Hit
GAGGAGGGGACACGCAGGGATGAGATGGGCAAAAAAAAACCAAAAAAAAAAAAAAA	105	0.15548645046645934	No Hit
GAGGAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	96	0.14215904042647715	No Hit
GAGGAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	94	0.13919739375092552	No Hit
GAGGAGGGGACACGCAGGGATGAGATGGGGAAAAAAAAACCAAAAAAAAAAAAAAA	93	0.13771657041314972	No Hit
GAGGAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAA	68	0.10069598696875463	No Hit
GAGGAGGGGGTGCAGTGCTGAGGAGGGGAAAAAAAAAAACCAAAAAAAAAAAAAAA	68	0.10069598696875463	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGTCTC	50	5.456968E-12	50.64706	40
GCTTGTC	50	5.456968E-12	50.64706	38
CATGTCT	15	0.007980171	50.647057	39
TGCCTCA	20	3.914329E-4	50.60889	41
GATCCTC	15	0.0080518555	50.53273	37
GACCACC	20	3.94357E-4	50.53273	37
TCTTAGT	20	3.987756E-4	50.41892	36
ATGCTTG	75	0.0	50.41892	36
ATGCTGG	15	0.008124018	50.41892	36
AGACCAC	15	0.008124018	50.41892	36
ATGCATG	15	0.008124018	50.41892	36
TATGCTT	75	0.0	50.381096	35
TATGCAT	15	0.008148179	50.381092	35
AGAGTCC	15	0.008148179	50.381092	35
CGATTAA	40	2.5138434E-9	50.230362	49
TTAGAGC	15	0.008269787	50.192825	34
ACTCTTA	15	0.008269787	50.192825	34
ATATGCC	15	0.008269787	50.192825	34
CCCACAC	15	0.008269787	50.192825	43
CCATATC	15	0.008269787	50.192825	43